GitLink Research Reproducibility End-to-End Workflow

中文说明：README.zh-CN.md

This repository is the independent submission repository for GitLink CLI Competition 2026, Subtrack 3: end-to-end automated workflow.

Competition Scope

The submitted work is a Track3 workflow that audits reproducibility evidence for GitLink-hosted research repositories. It combines authenticated GitLink CLI collection with a local checkout fallback, then produces reviewable reports and machine-readable outputs.

Workflow Outputs

For each target repository, the workflow generates:

Reproducibility score from 0 to 100.
Markdown audit report.
JSON summary.
Local Issue draft for follow-up tracking.
GitLink CLI command log for reviewer verification.
--fail-under gate for automated acceptance.

GitLink CLI Command Chain

Authenticated mode uses these GitLink CLI command families:

gitlink-cli repo +info
gitlink-cli repo +tree
gitlink-cli issue +list
gitlink-cli pr +list
gitlink-cli release +list

The workflow therefore uses five CLI command families, exceeding the Track3 requirement for at least three CLI or Skill calls.

Repository Layout

examples/workflows/research-reproducibility-assistant/: workflow implementation, scripts, tests, docs, fixtures, and example outputs.
evidence/: preflight and Track3 alignment evidence.
submission/: platform-facing description, demo script, final index, and checksum record.

Evidence Summary

Authenticated GitLink CLI run: gitlink-cli 0.2.0, user ZorIgn, target Gitlink/gitlink-cli, score 53/100, 10 recorded command events.
Official Gitlink/gitlink-cli local checkout demo: 77/100.
Positive-control fixture: 96/100.
Tests: 6 passed.
Robust preflight: 9 passed, 0 skipped.
Final package cleanliness: no skills/, no runtime caches, no local clone directories.

Quick Verification

cd examples\workflows\research-reproducibility-assistant
python -m py_compile .\scripts\research_reproducibility.py .\tests\test_research_reproducibility.py .\tests\test_output_artifacts.py .\tests\test_high_evidence_fixture.py
python -m pytest -q -p no:cacheprovider tests
.\scripts\run_demo.ps1 -FailUnder 70

Expected result:

6 passed
Workflow output validation passed

Key Evidence Files

Authenticated CLI output: examples/workflows/research-reproducibility-assistant/examples/real_gitlink_outputs/
Local checkout demo output: examples/workflows/research-reproducibility-assistant/examples/demo_outputs/
High-evidence fixture output: examples/workflows/research-reproducibility-assistant/examples/high_evidence_outputs/
Track3 review: evidence/track3-rebuild-review-2026-06-30.md
Platform description: submission/competition-entry.md
Final submission index: submission/final-submission-index.md

Remote Write Policy

The workflow performs read-only collection by default. Remote Issue creation is outside the automated audit path and requires an explicit operator command after reviewing the generated local Issue draft.