目录
- .cargorefactor: improve lint config1年前
- .githubchore(deps): bump actions/upload-artifact from 4 to 5 (#1703)3个月前
- datafix: correct CLI links to point to new index.html2年前
- dockertest: allow e2e to target dev and prod servers4个月前
- docsdocs: regenerate cli reference4个月前
- packageschore: release 3.18.03个月前
- paperdocs(paper): remove footer from preprint4年前
- scriptstest: add per-sequence ignores in validate-gff5个月前
- testschore: improve smoke testing script5个月前
- toolschore(build): split osxcross build out of the main dockerfile3年前
- .all-contributorsrcadd anna-parker to the list of contributors1年前
- .dockerignorechore(ci): publish prod docker images3年前
- .editorconfigchore: don't wrap lines in markdown files4年前
- .env.examplechore(ci): mirror missing musl gcc binaries8个月前
- .gitignorefeat: add pathogen.json example of schema usage6个月前
- .nvmrcchore: make sure package build and rebuild runs correctly3年前
- .readthedocs.ymlBump mambaforge to 23.111年前
- CHANGELOG.mdchore: release 3.18.03个月前
- CONTRIBUTING.mddocs: add dev guide3年前
- Cargo.lockchore: release 3.18.03个月前
- Cargo.tomlchore: release 3.18.03个月前
- LICENSEchore: migrate to nextstrain dockerhub and npm orgs5年前
- Makefilechore: prevent generation of core dump file1年前
- README.mdfeat: remove vercel logo11个月前
- clippy.tomlrefactor: fix lints introduced between rust 1.70.0-1.76.01年前
- rust-toolchain.tomlchore: upgrade rust to 1.76.01年前
- rustfmt.tomlchore: reorganize rust crates 3年前
邀请码
Nextclade
Viral genome clade assignment, mutation calling, and sequence quality checks
by Nextstrain team
🌎 clades.nextstrain.org
📜️ Citation
If you use results obtained with Nextclade in a publication, please
cite our paper:
(bibtex)
where possible, provide a link to Nextclade Web:
📗 Documentation
🧑💻 Development
Read developer guide here: docs/dev/developer-guide.md
✨ Team
Nextclade is a part of
Nextstrain project
.
It is maintained by:
Ivan Aksamentov
Senior Software Engineer
NeherLab, Biozentrum, University of Basel
Swiss Institute of Bioinformatics
Richard Neher
Principal Investigator
NeherLab, Biozentrum, University of Basel
Swiss Institute of Bioinformatics
Cornelius Roemer
Staff Scientist
NeherLab, Biozentrum, University of Basel
Swiss Institute of Bioinformatics
We are thankful to all our contributors, no matter how they contribute: in ideas, science, code, documentation or otherwise. Thanks goes to these people (emoji key):
Emma Hodcroft
🤔 ⚠️ 📢 👀
Anna Parker
💻 ⚠️ 🤔
Thomas Sibley
🚇 🛡️
Victor Lin
💻 📖
Theo Sanderson
💻
Natalie Stroud
🖋 🌍
Alex Rubinsteyn
📖
Christopher Bottoms
📖
Finlay Maguire
📖
dnanto
💻 🔣
This project follows the all-contributors specification. Contributions of any kind welcome!
⚖️ License
MIT License