目录
- PerlLibfix discrepancies in output gff3 by using transcript-specific instead of gene-level information5个月前
- TD2added explicit catch for 0 stop codon case. Also changed out-of-frame scoring to use psauron-style requirements, i.e. mean out of frame score < cutoff, rather than highest frame score3个月前
- apiresolve predict longorfs1年前
- testsupdate version11个月前
- utilprint Model_feat_name and CDS coords explicitly in warnings5个月前
- .gitignoreLongOrfs gff-writing logic fixed to account for ORF start and end spanning transcript resulting in erroneous UTRs, warning on readfq11个月前
- LICENSE.txtUpdate LICENSE.txt1年前
- MANIFEST.inUpdate MANIFEST.in1年前
- README.mdUpdate README.md11个月前
- notes.mdFinished composition visualizations1年前
- pytest.inisecond commit1年前
- setup.pyversion bump3个月前
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TD2
Visit the project wiki for all TD2 documentation :)
Preprint here: https://www.biorxiv.org/content/10.1101/2025.04.13.648579v1