Quickstart

ant jar java -jar dist/ReadSeq.jar

Description

Sequence reading library developed by the Ribosomal Database Project. Can handle genbank, embl, fasta, fastq, sff and sto files. Can read from files or streams, and can handle indexing files.

USAGE: ReadSeqMain <subcommand args …> random-sample - random select a subset or subregion of sequences reverse-comp - reverse complement sequences rm-dupseq - remove identical or substring of sequences select-seqs - select or deselect sequences from a file split - split sequences to-fasta - convert to fasta format to-fastq - convert to fastq format