bcbioBase

NOTE: bcbio-nextgen is no longer under active development. Refer to the notice of discontinuation for additional details.

Base functions for bcbio R packages.

This is an infrastructure package, providing a shared code framework for bulk RNA-seq and single-cell RNA-seq analysis.

Refer to our specialized packages for installation instructions:

• bcbioRNASeq: R package for bcbio RNA-seq analysis.
• bcbioSingleCell: R package for bcbio single-cell RNA-seq analysis.