metatree

Visualisation of polyphyletic groups between phylogenetic trees to a given reference tree.

Installation

• PyPI: pip install metatree
• conda: conda install -c bioconda metatree

Usage

NOTE: The reference tree must always be the first line in the batchfile.

metatree [batchfile] [out_dir] [taxonomy_file] [outgroup] [cpus]

See the example directory for an example on how to use metatree.

Changelog

0.0.1
  - Initial release.

Citing

Please cite this repository if you use it in your work.