evofr: Evolutionary forecasting for genetic variants

Overview

evofr is a Python package designed for evolutionary forecasting of genetic variants. This project provides tools aimed at modeling and predicting the evolution and prevalence of genetic variants over time. The package integrates various data handling, modeling, and plotting capabilities.

Installation

The latest release of this package can be installed with:

pip install evofr

Installing locally

The package can be built locally by running

poetry build

The package can then be installed from the resulting wheel file using

pip install <path-to-wheel>

Releasing a new version

Bump the version in pyproject.toml, following semantic versioning rules, and push to the main branch. Create a new release on GitHub using the new version number as the tag. Locally, run poetry build to build the distribution package.

Setup an API token to publish to PyPI, if you haven’t before. Configure poetry to register your PyPI credentials.

Run poetry publish to upload the package to PyPI.