This packages provides output files from common transcript estimation
software (Salmon, Kallisto, RSEM, Cufflinks) for demonstration of
import using tximport.
The files are a subset of 6 samples from the
GEUVADIS project. The citation for the GEUVADIS project is:
Lappalainen et al, “Transcriptome and genome sequencing uncovers functional variation in
humans”, Nature, 2013.
THIS REPO IS NOT CURRENT, USE BIOC
tximportData
This packages provides output files from common transcript estimation software (Salmon, Kallisto, RSEM, Cufflinks) for demonstration of import using tximport. The files are a subset of 6 samples from the GEUVADIS project. The citation for the GEUVADIS project is:
Lappalainen et al, “Transcriptome and genome sequencing uncovers functional variation in humans”, Nature, 2013.
http://www.nature.com/nature/journal/v501/n7468/full/nature12531.html?WT.ec_id=NATURE-20130926