目录
- .githubchore: add a github action to prevent merging of files from .gitignore2年前
- antismashclusterblast: remove unused orthologous group function5个月前
- dockerdockerfile: Update for debian 12 base container1年前
- .gitignoreclusterblast: cache protein metadata and load lazily7个月前
- .pylintrcchore: Make pylint less touchy about a bit of duplication1年前
- CONTRIBUTING.mdchore: fix out of date minimum python version in CONTRIBUTING.md5年前
- Dockerfilechore: Add meme-suite dependency back to the dev container until we figure out how to drop it completely1年前
- LICENSE.txtInitialise the antiSMASH 5 repository9年前
- Makefileclusterblast: cache protein metadata and load lazily7个月前
- README.mdchore: Move Manchester to the list of past contributors3年前
- pytest.inichore: re-silence Cython warnings silenced by numpy and unsilenced by pytest6年前
- run_antismash.pychore: gracefully exit from SIGINT without stack traces2年前
- setup.cfggenefunctions: refactor to allow for more variety in tool methods1年前
- setup.pychore: update jsonschema to a version compatible with both 3.13 and 3.146个月前
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antiSMASH - the antibiotics and Secondary Metabolite Analysis SHell
Development & Funding
The development of antiSMASH was started as a collaboration of the Department of Microbial Physiology and Groningen Bioinformatics Centre of the University of Groningen, the Department of Microbiology of the University of Tübingen, the Manchester Institute of Biotechnology, and the Department of Bioengineering and Therapeutic Sciences at the University of California, San Francisco. With the move of the PIs and developers, development continues now at the Bioinformatics Group at Wageningen University and The Novo Nordisk Foundation Center for Biosustainability in Lyngby.
antiSMASH development was/is supported by the GenBiotics program of the Dutch Technology Foundation (STW), which is the applied-science division of The Netherlands Organisation for Scientific Research (NWO) and the Technology Programme of the Ministry of Economic Affairs (grant STW 10463), GenBioCom program of the German Ministry of Education and Research (BMBF) grant 0315585A, the German Center for Infection Research (DZIF) and the Novo Nordisk Foundation.
Publications
See http://antismash.secondarymetabolites.org/#!/about for information on citing antiSMASH.
Installation
There are multiple options on how to get your own copy of antiSMASH up and running. See our install documentation for detailed information.
Note: while efforts are made to keep antiSMASH cross-platform, Windows is not officially supported.
License
antiSMASH is an open source tool available under the GNU Affero General Public License version 3.0 or greater. See the
LICENSE.txtfile for details.Acknowledgements
Some icons used courtesy of fontawesome.com