目录
- .githubfunguild work w/out -o and add release docker build4年前
- amptkfix for bug #101 where qCount is None not 02年前
- docstry to fix readthedocs2年前
- scriptsadd custom db shortcut option #80; add --sintax_db option to tax; move wrapper to console entry;5年前
- test_datafix bug in taxonomy, unify basenaming, and many py2/py3 fixes8年前
- .gitignorebug fix for amptk database; fix ITS and PR2 dbs, refine funguild4年前
- .readthedocs.yamltry to fix readthedocs2年前
- Dockerfiletry two step build4年前
- Dockerfile2bump ITS db to v8.3; add PR2 draft DB, clean up dockerbuild folder4年前
- LICENSE.mdupdates to v0.3.410年前
- MANIFEST.inadd dockerfile/workflow and test4年前
- README.mdUpdate README.md5年前
- amptk-dockerbump ITS db to v8.3; add PR2 draft DB, clean up dockerbuild folder4年前
- setup.pybug fix for amptk database; fix ITS and PR2 dbs, refine funguild4年前
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AMPtk
NGS AMPlicon Tool Kit:
Documentation: http://amptk.readthedocs.io/
Citation
Palmer JM, Jusino MA, Banik MT, Lindner DL. 2018. Non-biological synthetic spike-in controls and the AMPtk software pipeline improve mycobiome data. PeerJ 6:e4925; DOI 10.7717/peerj.4925.
https://peerj.com/articles/4925/