目录
- .githubRun github workflow on R 4.2.1 (consistent w/ Bioc)3年前
- RMerge branch 'devel' of git.bioconductor.org:packages/NanoTube1年前
- dataAdding examples and other help details5年前
- instCleaning up vignette to avoid warnings.3年前
- manAllow optional arguments in runLimmaAnalysis.3年前
- testsFixing errors in examples.5年前
- vignettesCleaning up vignette to avoid warnings.3年前
- DESCRIPTIONVersion bump1年前
- LICENSECreate LICENSE4年前
- NAMESPACEAllow for RCC file names as input to processNanostringData3年前
- NEWS.mdVersion bump1年前
- README.mdAdd option to specify CodeClasses in runLimmaAnalysis, nanostringPCA.3年前
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NanoTube
The NanoTube is on Bioconductor!
NanoTube includes functions for the processing, quality control, analysis, and visualization of NanoString nCounter data. Analysis functions include differential analysis and gene set analysis methods, as well as postprocessing steps to help understand the results. Additional functions are included to enable interoperability with other Bioconductor NanoString data analysis packages.
Many more details can be found in the vignette (vignettes/NanoTube.Rmd).
If you use the NanoTube in your work, please cite: Class CA, Lukan CJ, Bristow CA, Do KA. “Easy NanoString nCounter data analysis with the NanoTube.” Bioinformatics 2023; 39(1): btac762. https://doi.org/10.1093/bioinformatics/btac762