MSTmap C++

A software tool that builds genetic linkage maps efficiently and accurately.

• This repository is for the C++ executable version of MSTmap. For the online version, navigate to MSTmap online at https://www.mstmap.org/

• For the Python library, refer to https://github.com/ucrbioinfo/MSTmap-Python

• For the R package, see https://rdrr.io/cran/ASMap/man/mstmap.cross.html

If you have CONDA: type conda install mstmap to download the executable.

To download the source code, type git clone https://github.com/ucrbioinfo/MSTmap

To compile, type cd MSTmap then make (g++ is required)

Manual: GitHub Wiki

To execute, type ./mstmap example.txt output.txt

Questions: email stelo@cs.ucr.edu