CiteFuse

CiteFuse is a streamlined package consisting of a suite of tools for pre-processing, modality integration, clustering, differential RNA and ADT expression analysis, ADT evaluation, ligand-receptor interaction analysis, and interactive web-based visualization of CITE-seq data

Installation

Install CiteFuse via Bioconductor

library(BiocManager)
BiocManager::install("CiteFuse")

Install github version CiteFuse

BiocManager::install("SydneyBioX/CiteFuse")

Vignette

You can find the vignette at our website: https://sydneybiox.github.io/CiteFuse/articles/CiteFuse.html.

CiteFuse overview

Citation